core

Central core of the C++ library of Egglib. More...

Classes
class	Align
	Handles a sequence alignment. More...
class	CharMatrix
	Interface for classes usable as a square matrix of characters. More...
class	Container
	Handles a set of sequence alignment (aligned or not) More...
class	Convert
	Performs conversion between sequence holder types. More...
class	DataMatrix
	Data table. More...
class	EggException
	Base exception type for errors occurring in this library. More...
class	EggMemoryError
	Exception type for memory errors. More...
class	EggArgumentValueError
	Exception type for argument value errors. More...
class	EggRuntimeError
	Exception type for runtime errors. More...
class	EggFormatError
	Exception type for file/string formatting errors. More...
class	EggOpenFileError
	Exception type for errors while opening a file. More...
class	EggUnalignedError
	Exception type for unaligned sequences. More...
class	EggInvalidCharacterError
	Exception type for invalid character. More...
class	Fasta
	Fasta parser/formatter. More...
class	Ms
	ms-like sequence format parser More...
class	Random
	Pseudo-random number generator. More...
class	Staden
	Parser of Staden output format. More...

Detailed Description

Central core of the C++ library of Egglib.

Data storage classes, parsers/formatters and tools, plus exception types.