=========================== Top-level Egglib components =========================== Top-level Egglib utilities consist mostly in data storage classes: :class:`~egglib.Container` and :class:`~egglib.Align` for sequence data, :class:`~egglib.SSR` for microsatellite data, :class:`~egglib.GenBank` for annotated sequences and :class:`~egglib.Tree` for trees. --------------- Class Container --------------- .. autoclass:: egglib.Container :members: :inherited-members: :show-inheritance: ----------- Class Align ----------- .. autoclass:: egglib.Align :members: :inherited-members: :show-inheritance: ------------------ Class SequenceItem ------------------ .. autoclass:: egglib.SequenceItem :members: :inherited-members: --------- SSR class --------- .. autoclass:: egglib.SSR :members: :inherited-members: :show-inheritance: ---------- TIGR class ---------- .. autoclass:: egglib.TIGR :members: :inherited-members: :show-inheritance: ------------- GenBank class ------------- .. autoclass:: egglib.GenBank :members: :inherited-members: :show-inheritance: .. autoclass:: egglib.GenBankFeature :members: :inherited-members: :show-inheritance: .. autoclass:: egglib.GenBankFeatureLocation :members: :inherited-members: :show-inheritance: ---------- Tree class ---------- .. autoclass:: egglib.Tree :members: :inherited-members: :show-inheritance: .. autoclass:: egglib.TreeNode :members: :inherited-members: :show-inheritance: